1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g44312

Msp_g44312


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44312

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00231360 evm_27.TU.AmTr_v1... GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G27950 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03980 No alias SGNH hydrolase-type esterase superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g07100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0068.g036441 No alias not classified & original description: CDS=86-1105 0.04 OrthoFinder output from all 47 species
Cba_g23667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g52174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G086500.1 Ceric.10G086500 not classified & original description: pacid=50613196... 0.03 OrthoFinder output from all 47 species
Ceric.10G086800.1 Ceric.10G086800 not classified & original description: pacid=50612051... 0.03 OrthoFinder output from all 47 species
Ceric.10G087000.1 Ceric.10G087000 not classified & original description: pacid=50612007... 0.04 OrthoFinder output from all 47 species
Ceric.10G087700.1 Ceric.10G087700 not classified & original description: pacid=50613448... 0.04 OrthoFinder output from all 47 species
Dde_g48022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031290001 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_11296 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_16234 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_22250 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11750.1 LOC_Os01g11750 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g11760.1 LOC_Os01g11760 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g22780.1 LOC_Os01g22780 GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04240.1 LOC_Os05g04240 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g11970.1 LOC_Os05g11970 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g06250.2 LOC_Os06g06250 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g08276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17030 FXG1, ATFXG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_190687g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_355364g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g01991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011192 No alias not classified & original description: CDS=151-1320 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018488 No alias not classified & original description: CDS=67-894 0.03 OrthoFinder output from all 47 species
Sam_g14727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099060.3.1 Solyc01g099060 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 OrthoFinder output from all 47 species
Spa_g48087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014225_P001 Zm00001e014225 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e026048_P001 Zm00001e026048 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027180_P002 Zm00001e027180 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027181_P001 Zm00001e027181 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e032079_P005 Zm00001e032079 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 9 179
No external refs found!