Msp_g44272 (KNAT3)

Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g44272
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00085p00165180	KNAT6, KNAT6L,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.03	OrthoFinder output from all 47 species
AT1G62990	KNAT7, IXR11	KNOTTED-like homeobox of Arabidopsis thaliana 7	0.02	OrthoFinder output from all 47 species
AT5G25220	KNAT3	KNOTTED1-like homeobox gene 3	0.03	OrthoFinder output from all 47 species
Aev_g21619	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15588	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g08816	KNAT3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70104	KNAT3	KNOX-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Azfi_s0350.g066569	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: CDS=1-1488	0.04	OrthoFinder output from all 47 species
Ceric.10G031700.1	KNAT3, Ceric.10G031700	KNOX-type transcription factor & original description:...	0.09	OrthoFinder output from all 47 species
Ceric.15G063000.1	KNAT4, Ceric.15G063000	KNOX-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g01546	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11389	KNAT3	KNOX-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g48747	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009273001	BP, BP1, KNAT1	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
GSVIVT01031241001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_00572	BP, BP1, KNAT1	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Gb_00573	BUM1, SHL, STM,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os03g03164.2	KNAT7, IXR11,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
LOC_Os03g51710.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os03g56140.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Len_g56773	KNAT3	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
MA_10428446g0010	BP, BP1, KNAT1	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Mp5g01600.1	BUM1, SHL, STM,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Nbi_g05715	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g27135	KNAT3	KNOX-type transcription factor & original description: none	0.11	OrthoFinder output from all 47 species
Ore_g25530	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g35975	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g62008	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g18663	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c18_18750V3.1	Pp3c18_18750	KNOTTED1-like homeobox gene 6	0.01	OrthoFinder output from all 47 species
Pp3c19_5610V3.1	Pp3c19_5610	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c5_26440V3.1	KNAT3, Pp3c5_26440	KNOTTED1-like homeobox gene 3	0.02	OrthoFinder output from all 47 species
Ppi_g15325	KNAT4	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g16367	KNAT3	KNOX-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019793	KNAT4	KNOX-type transcription factor & original description: CDS=1-1188	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020964	BUM1, SHL, STM,...	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Smo159366	BP, BP1, KNAT1	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Solyc12g010410.3.1	KNAT4, Solyc12g010410	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Spa_g22911	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g29512	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47799	KNAT3	KNOX-type transcription factor & original description: none	0.1	OrthoFinder output from all 47 species
Spa_g47800	KNAT4	KNOX-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g56194	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g45614	KNAT4	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g45916	KNAT3	KNOX-type transcription factor & original description: none	0.11	OrthoFinder output from all 47 species
Zm00001e000173_P003	KNAT7, IXR11,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e005170_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e039044_P001	KNAT7, IXR11,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005541	KNOX2	228	275
IPR005540	KNOX1	165	203
IPR008422	Homeobox_KN_domain	379	418

External Links

No external refs found!

Msp_g44272 (KNAT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation