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  5. Msp_g44058

Msp_g44058


Description : ribosome biogenesis factor *(CRASS) & original description: none


Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44058

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00224760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G14910 No alias Heavy metal transport/detoxification superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g02821 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13367 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02832 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04787 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060247 No alias ribosome biogenesis factor *(CRASS) & original... 0.04 OrthoFinder output from all 47 species
Cba_g09614 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G033000.1 Ceric.01G033000 ribosome biogenesis factor *(CRASS) & original... 0.06 OrthoFinder output from all 47 species
Dac_g12212 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36209 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01032527001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_22864 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27100.1 LOC_Os05g27100 ribosome biogenesis factor (CRASS) 0.06 OrthoFinder output from all 47 species
Lfl_g37391 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
MA_59576g0010 No alias ribosome biogenesis factor (CRASS) 0.03 OrthoFinder output from all 47 species
Mp6g04290.1 No alias ribosome biogenesis factor (CRASS) 0.09 OrthoFinder output from all 47 species
Pp3c1_25290V3.1 Pp3c1_25290 Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Ppi_g00577 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024792 No alias ribosome biogenesis factor *(CRASS) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g087150.3.1 Solyc02g087150 ribosome biogenesis factor (CRASS) 0.08 OrthoFinder output from all 47 species
Spa_g10440 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e031534_P001 Zm00001e031534 ribosome biogenesis factor (CRASS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!