1. Home
  2. Species
  3. Selaginella moellendorfii
  4. Sequence
  5. Smo93442

Smo93442 (PACid_15421241)


Aliases : PACid_15421241

Description : 31.4 cell.vesicle transport member of SYP12 Gene Family syntaxin of plants 124 (SYP124) CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011) BEST Arabidopsis thaliana protein match is: syntaxin of plants 125 (TAIR:AT1G11250.1) Has 2975 Blast hits to 2948 proteins in 317 species: Archae - 21 Bacteria - 77 Metazoa - 1321 Fungi - 552 Plants - 504 Viruses - 0 Other Eukaryotes - 500 (source: NCBI BLink). & (loc_os06g39050.1 : 269.0


Gene families : OG_01_0000325 (Gene family) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo93442
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.03 Gene family
LOC_Os02g11890 Os02g0209900 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.03 Gene family
Solyc01g006950.3.1 Solyc01g006950.3 31.4 cell.vesicle transport Encodes a syntaxin localized... 0.03 Gene family
Zm00001d018867 GRMZM2G044527 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.01 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 35 238
No external refs found!