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  5. Msp_g43551

Msp_g43551 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43551

Target Alias Description ECC score Gene Family Method Actions
Ala_g01500 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06359 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62756 VAC1, ECB2, ATECB2 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Cba_g07718 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g32572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36324 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17237 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44865 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50023 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
LOC_Os03g49930.1 LOC_Os03g49930 Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Len_g19013 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g30334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56529 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34313 No alias ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Smo116559 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.07 OrthoFinder output from all 47 species
Solyc01g100340.4.1 Solyc01g100340 Pentatricopeptide repeat-containing protein At1g09190... 0.04 OrthoFinder output from all 47 species
Spa_g27468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23253 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28482 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44225 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 44 91
IPR002885 Pentatricopeptide_repeat 146 186
No external refs found!