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  5. Msp_g43379

Msp_g43379


Description : not classified & original description: none


Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43379

Target Alias Description ECC score Gene Family Method Actions
Ala_g07772 SDG25, ATXR7 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g39316 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
Als_g32779 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g24243 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g10001 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
MA_14080g0020 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g13977 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Msp_g14383 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!