Msp_g43254 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.03 OrthoFinder output from all 47 species
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 OrthoFinder output from all 47 species
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g22695 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39346 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26309 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02221 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08029 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51474 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05834 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07935 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30155 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35135 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03879.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04997.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40354.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene42895.t1 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52606.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09346 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15317 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G057000.1 EXPA2, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G024200.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G040100.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040200.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040300.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040400.1 Ceric.17G040400 not classified & original description: pacid=50618134... 0.03 OrthoFinder output from all 47 species
Ceric.17G040500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041200.1 EXP15, ATEXPA15,... not classified & original description: pacid=50618023... 0.05 OrthoFinder output from all 47 species
Ceric.17G041400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041700.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042000.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042100.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042200.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042300.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042500.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z063100.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z225900.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G024500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G054100.1 ATEXPA3, EXP3,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g01318 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06899 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08720 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10261 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15610 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15611 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16993 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16994 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40575 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43609 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00758 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46781 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01048 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Gb_20678 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os01g14650.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os02g51040.1 ATEXPA10,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g21820.1 EXPA8, ATHEXP... alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os05g19570.1 LOC_Os05g19570 alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g30330.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os10g30340.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g39110.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g40710.1 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os10g40730.1 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g16681 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20899 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36480 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40078 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59336 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28510 ATEXPL2, EXPL2,... alpha-like-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35332 ATEXPA11, ATHEXP... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10020g0010 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_10313796g0010 EXPB1, ATEXPB1,... Expansin-B16 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_14588g0010 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_166764g0010 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_18265g0010 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_45587g0020 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g06900.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp4g22180.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp5g20420.1 EXPA16, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g30143 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35092 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44170 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08930 EXPB1, ATEXPB1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07847 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20452 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25427 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27761 ATEXPA1, EXP1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30072 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40782 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43051 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g31032 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47012 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08562 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32028 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=682-1482 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009021 ATHEXP ALPHA... not classified & original description: CDS=1-1083 0.02 OrthoFinder output from all 47 species
Smo231226 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 OrthoFinder output from all 47 species
Smo75237 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo90935 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc06g076220.3.1 EXPA6, ATEXP6,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc08g007780.3.1 EXPA18, EXP18,... Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc08g080060.4.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g11698 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25448 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25562 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42064 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48547 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54039 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14482 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002332_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e002335_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e004716_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004720_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e006194_P001 ATEXPA3, EXP3,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e007438_P001 EXPB3, ATEXPB3,... beta-class expansin 0.05 OrthoFinder output from all 47 species
Zm00001e014231_P001 ATEXPA10,... Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e015337_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e033407_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036693_P001 EXPA18, EXP18,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e041519_P002 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 238 314
IPR009009 RlpA-like_DPBB 141 226
No external refs found!