Msp_g43218 (TUA3)

Aliases : TUA3

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g43218

Target	Alias	Description	ECC score	Gene Family Method
Adi_g088318	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.12G047500.1	TOR2, TUA4,...	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
GSVIVT01033415001	TUA3	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
LOC_Os03g11970.1	TUA3, LOC_Os03g11970	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Msp_g34497	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Pir_g32102	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.07	OrthoFinder output from all 47 species
Smo230058	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Smo230496	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.06	OrthoFinder output from all 47 species
Solyc02g091870.3.1	TUA6, Solyc02g091870	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	3	213
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	263	392

External Links

No external refs found!