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  5. Msp_g42770

Msp_g42770


Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42770

Target Alias Description ECC score Gene Family Method Actions
AT5G02570 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31074 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58527.t1 HTB4, Aspi01Gene58527 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58540.t1 HTB1, Aspi01Gene58540 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58547.t1 HTB4, Aspi01Gene58547 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.85 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Dac_g01811 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38216 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44717 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19092 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14460 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23041 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435143g0020 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10436516g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10436516g0020 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10436516g0030 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_77198g0010 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
Pir_g31996 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 121
No external refs found!