Msp_g42720 (SMG7)

Aliases : SMG7

Description : Nonsense-Mediated mRNA Decay protein *(SMG7) & original description: none

Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g42720

Target	Alias	Description	ECC score	Gene Family Method
Ala_g02690	SMG7	Nonsense-Mediated mRNA Decay protein *(SMG7) & original...	0.02	OrthoFinder output from all 47 species
Ceric.27G021400.1	SMG7, Ceric.27G021400	Nonsense-Mediated mRNA Decay protein *(SMG7) & original...	0.03	OrthoFinder output from all 47 species
Dac_g12623	SMG7	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g07446	SMG7	Nonsense-Mediated mRNA Decay protein *(SMG7) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g05947	SMG7	Nonsense-Mediated mRNA Decay protein *(SMG7) & original...	0.03	OrthoFinder output from all 47 species
Sam_g25590	No alias	Nonsense-Mediated mRNA Decay protein *(SMG7) & original...	0.02	OrthoFinder output from all 47 species
Smo410159	SMG7	RNA processing.RNA decay.Nonsense-Mediated mRNA Decay...	0.02	OrthoFinder output from all 47 species
Tin_g09978	SMG7	Nonsense-Mediated mRNA Decay protein *(SMG7) & original...	0.05	OrthoFinder output from all 47 species
Zm00001e009613_P002	SMG7, Zm00001e009613	SMG7 Nonsense-Mediated mRNA Decay protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018834	DNA/RNA-bd_Est1-type	207	531
IPR019458	Est1-like_N	73	194

External Links

No external refs found!