Aliases : SC35, ATSC35, At-SC35
Description : not classified & original description: none
Gene families : OG0001818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001818_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g014953 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g08909 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07245 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.15G003400.1 | SC35, ATSC35,... | not classified & original description: pacid=50640903... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14869 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g14870 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g07538 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Mp3g22400.1 | SC35, ATSC35, At-SC35 | Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g03028 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g105140.3.1 | SC35, ATSC35,... | Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g074040.3.1 | SC35, ATSC35,... | Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g41507 | SC35, ATSC35, At-SC35 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000491 | small nucleolar ribonucleoprotein complex assembly | IEP | HCCA |
BP | GO:0000492 | box C/D snoRNP assembly | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 19 | 87 |
No external refs found! |