Msp_g42608


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42608

Target Alias Description ECC score Gene Family Method Actions
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g02750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g53257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30194.t1 Aspi01Gene30194 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30197.t1 Aspi01Gene30197 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Dac_g02144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g03734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g17880.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g10178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005608_P001 Zm00001e005608 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 30 61
IPR001680 WD40_repeat 120 165
IPR001680 WD40_repeat 73 110
No external refs found!