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  5. Msp_g42535

Msp_g42535 (ATRPA2, ATRPA32A,...)


Aliases : ATRPA2, ATRPA32A, RPA2, ROR1, RPA32A

Description : component *(RPA2) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0003036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42535
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Als_g07620 ATRPA2,... component *(RPA2) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Dac_g41142 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Len_g10816 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 75 149
No external refs found!