AMTR_s00019p00118960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.95

Description : Protein translocation.chloroplast.inner envelope TIC translocation system.Tic55 component


Gene families : OG_01_0006467 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006467_tree ,
OG_02_0008625 (LandPlants) Phylogenetic Tree(s): OG_02_0008625_tree ,
OG_03_0009070 (SeedPlants) Phylogenetic Tree(s): OG_03_0009070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00118960
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT2G24820 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II 0.03 Archaeplastida
GSVIVT01036007001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 Archaeplastida
Gb_20939 No alias component Tic55 of inner envelope TIC translocation system 0.04 Archaeplastida
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 Archaeplastida
MA_1914g0020 No alias component Tic55 of inner envelope TIC translocation system 0.02 Archaeplastida
Mp8g17030.1 No alias component Tic55 of inner envelope TIC translocation system 0.05 Archaeplastida
Pp3c7_15550V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.03 Archaeplastida
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 Archaeplastida
GSVIVT01036007001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 LandPlants
Gb_20939 No alias component Tic55 of inner envelope TIC translocation system 0.02 LandPlants
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.02 LandPlants
MA_1914g0020 No alias component Tic55 of inner envelope TIC translocation system 0.02 LandPlants
Mp8g17030.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 LandPlants
Pp3c7_15550V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.03 LandPlants
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 LandPlants
GSVIVT01036007001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 SeedPlants
Gb_20939 No alias component Tic55 of inner envelope TIC translocation system 0.01 SeedPlants
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.02 SeedPlants
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013626 PaO 306 391
IPR017941 Rieske_2Fe-2S 102 189
No external refs found!