1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g42321

Msp_g42321


Description : not classified & original description: none


Gene families : OG0003132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42321
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Adi_g123968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21557 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g70302 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g70303 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.10G012700.1 Ceric.10G012700 not classified & original description: pacid=50613247... 0.02 OrthoFinder output from all 47 species
Ceric.13G096900.1 Ceric.13G096900 not classified & original description: pacid=50636239... 0.05 OrthoFinder output from all 47 species
Dde_g47761 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g47869 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g13229 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g58541 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29030 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g29724 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g30059 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g24634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13115 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo437311 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g48498 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g48534 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g46348 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 245 389
IPR012951 BBE 673 713
No external refs found!