1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g42148

Msp_g42148


Description : not classified & original description: none


Gene families : OG0000039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42148
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g024098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07097.t1 Aspi01Gene07097 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36113.t1 Aspi01Gene36113 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38714.t1 Aspi01Gene38714 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g02963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 234 248
No external refs found!