Msp_g41375


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g41375

Target Alias Description ECC score Gene Family Method Actions
Adi_g055183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aev_g21644 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.12 OrthoFinder output from all 47 species
Azfi_s0092.g042995 No alias not classified & original description: CDS=1-2949 0.06 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g13896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36071 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g77637 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08608 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36893 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05220 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.12 OrthoFinder output from all 47 species
Len_g01813 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g03845 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05196 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g17343 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18289 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32051 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32191 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g29911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000718 No alias not classified & original description: CDS=152-1756 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006120 No alias ssDNA-binding protein *(OSB) & original description: CDS=52-378 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007041 No alias ssDNA-binding protein *(OSB) & original description: CDS=241-3261 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018363 No alias not classified & original description: CDS=1-1818 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020144 No alias not classified & original description: CDS=1-1437 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021792 EMB2758 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024545 No alias not classified & original description: CDS=305-3223 0.04 OrthoFinder output from all 47 species
Sam_g38690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42246 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05541 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14048 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g25572 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g26879 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44042 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 276 321
IPR002885 Pentatricopeptide_repeat 172 219
IPR002885 Pentatricopeptide_repeat 71 118
IPR002885 Pentatricopeptide_repeat 45 67
No external refs found!