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  5. Msp_g41066

Msp_g41066 (AtRABH1e, RABH1e)


Aliases : AtRABH1e, RABH1e

Description : H-class RAB GTPase & original description: none


Gene families : OG0001773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g41066

Target Alias Description ECC score Gene Family Method Actions
Ala_g06784 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Cre01.g047550 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dcu_g07473 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09589 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13691 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426002g0010 AtRABH1e, RABH1e Ras-related protein RABH1e OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10426002g0020 AtRABH1e, RABH1e H-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_131015g0010 AtRABH1e, RABH1e Ras-related protein RABH1e OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g03960.1 AtRABH1e, RABH1e H-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g04692 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15790 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21059 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05988 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01599 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 37 195
No external refs found!