Msp_g40775

Description : component *(eS26) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001368_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g40775

Target	Alias	Description	ECC score	Gene Family Method
AT2G40510	No alias	Ribosomal protein S26e family protein	0.04	OrthoFinder output from all 47 species
AT2G40590	No alias	Ribosomal protein S26e family protein	0.05	OrthoFinder output from all 47 species
AT3G56340	No alias	Ribosomal protein S26e family protein	0.06	OrthoFinder output from all 47 species
Aop_g30554	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0008.g011486	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Azfi_s0038.g026316	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001486.9	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Cre16.g682300	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.06	OrthoFinder output from all 47 species
Dac_g33608	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Dcu_g02248	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g01928	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ehy_g13993	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01032696001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
Gb_00995	No alias	component RPS26 of SSU proteome	0.08	OrthoFinder output from all 47 species
Gb_00996	No alias	component RPS26 of SSU proteome	0.02	OrthoFinder output from all 47 species
LOC_Os01g60790.1	LOC_Os01g60790	component RPS26 of SSU proteome	0.03	OrthoFinder output from all 47 species
LOC_Os05g39960.1	LOC_Os05g39960	component RPS26 of SSU proteome	0.07	OrthoFinder output from all 47 species
Lfl_g40318	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
MA_114136g0010	No alias	component RPS26 of SSU proteome	0.02	OrthoFinder output from all 47 species
MA_74546g0010	No alias	component RPS26 of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp2g06210.1	No alias	component RPS26 of SSU proteome	0.04	OrthoFinder output from all 47 species
Pp3c16_9210V3.1	Pp3c16_9210	Ribosomal protein S26e family protein	0.03	OrthoFinder output from all 47 species
Pp3c5_16070V3.1	Pp3c5_16070	Ribosomal protein S26e family protein	0.02	OrthoFinder output from all 47 species
Pp3c6_8910V3.1	Pp3c6_8910	Ribosomal protein S26e family protein	0.05	OrthoFinder output from all 47 species
Ppi_g34120	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014966	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g47002	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Smo77589	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Solyc04g008810.3.1	Solyc04g008810	component RPS26 of SSU proteome	0.09	OrthoFinder output from all 47 species
Spa_g03106	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Spa_g09980	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Spa_g25276	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Tin_g26404	No alias	component *(eS26) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e011780_P001	Zm00001e011780	component RPS26 of SSU proteome	0.06	OrthoFinder output from all 47 species
Zm00001e027298_P001	Zm00001e027298	component RPS26 of SSU proteome	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004743	pyruvate kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
CC	GO:0008290	F-actin capping protein complex	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
BP	GO:0030834	regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	HCCA
MF	GO:0030955	potassium ion binding	IEP	HCCA
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	HCCA
MF	GO:0031420	alkali metal ion binding	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032272	negative regulation of protein polymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0051016	barbed-end actin filament capping	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0051693	actin filament capping	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901880	negative regulation of protein depolymerization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000892	Ribosomal_S26e	24	129

External Links

No external refs found!

Msp_g40775

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation