Msp_g40594


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g40594

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g013922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g019260 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37820 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03671 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02316.t1 Aspi01Gene02316 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22046.t1 Aspi01Gene22046 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25447.t1 Aspi01Gene25447 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46912.t1 Aspi01Gene46912 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60910.t1 Aspi01Gene60910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04666 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29842 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g29857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31308 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G038000.1 Ceric.04G038000 not classified & original description: pacid=50632532... 0.05 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.05 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18756 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26029 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g29464 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g46461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17734 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18520 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g30890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33499 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43662 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Msp_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g27086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27237 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g27304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28016 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34545 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44820 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15833 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16586 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47301 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63820 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04436 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08728 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005517 CRR22 not classified & original description: CDS=1-2004 0.06 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo117959 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20413 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g46355 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 458 505
IPR002885 Pentatricopeptide_repeat 230 250
IPR002885 Pentatricopeptide_repeat 128 150
IPR002885 Pentatricopeptide_repeat 56 85
IPR002885 Pentatricopeptide_repeat 662 691
IPR002885 Pentatricopeptide_repeat 936 959
IPR002885 Pentatricopeptide_repeat 533 553
IPR002885 Pentatricopeptide_repeat 760 807
IPR002885 Pentatricopeptide_repeat 154 200
IPR002885 Pentatricopeptide_repeat 255 304
IPR002885 Pentatricopeptide_repeat 357 403
IPR002885 Pentatricopeptide_repeat 558 605
IPR002885 Pentatricopeptide_repeat 862 908
No external refs found!