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  5. Msp_g40400

Msp_g40400 (PDE181, ZDS, SPC1)


Aliases : PDE181, ZDS, SPC1

Description : zeta-carotene desaturase *(ZDS) & original description: none


Gene families : OG0004455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004455_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g40400
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00029180 PDE181, ZDS,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Cba_g18804 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.43 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
Cre07.g314150 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
Lfl_g05500 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12002 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010946 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description:... 0.02 OrthoFinder output from all 47 species
Smo146971 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 1 421
No external refs found!