Msp_g39832


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g39832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g023734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049688 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038550 EMB2758 not classified & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Azfi_s0999.g094975 No alias not classified & original description: CDS=29-2698 0.03 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15165 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.03 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.05 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.04 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.04 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.02 OrthoFinder output from all 47 species
Dde_g04851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.04 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Msp_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07434 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 9 31
IPR002885 Pentatricopeptide_repeat 36 68
No external refs found!