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  5. Msp_g39582

Msp_g39582


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g39582
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10719 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10720 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12748 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18114 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18531 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20368 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20723 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16993 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24708 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07065 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08007 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47599 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02833 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04970 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11400 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17432 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21986 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26785 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07316.t2 VGDH1, Aspi01Gene07316 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10492.t1 Aspi01Gene10492 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11134.t1 Aspi01Gene11134 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24083.t2 Aspi01Gene24083 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30602.t1 Aspi01Gene30602 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30603.t1 Aspi01Gene30603 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene31942.t1 Aspi01Gene31942 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34270.t1 Aspi01Gene34270 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55625.t1 Aspi01Gene55625 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene59347.t1 Aspi01Gene59347 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59355.t1 Aspi01Gene59355 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71978.t1 Aspi01Gene71978 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008437 No alias pectin methylesterase & original description: CDS=79-1257 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026612 No alias pectin methylesterase & original description: CDS=139-1269 0.05 OrthoFinder output from all 47 species
Azfi_s0055.g033955 No alias pectin methylesterase & original description: CDS=387-1493 0.04 OrthoFinder output from all 47 species
Azfi_s0103.g044651 No alias pectin methylesterase & original description: CDS=1-1083 0.03 OrthoFinder output from all 47 species
Azfi_s0516.g074982 No alias not classified & original description: CDS=1-498 0.05 OrthoFinder output from all 47 species
Azfi_s0648.g080905 No alias pectin methylesterase & original description: CDS=1-489 0.04 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.03G061600.1 Ceric.03G061600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G071300.1 Ceric.10G071300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G071400.1 Ceric.10G071400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G006300.1 Ceric.11G006300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037400.1 Ceric.13G037400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.24G024700.1 Ceric.24G024700 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.37G019300.1 Ceric.37G019300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G019400.1 Ceric.37G019400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23541 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07472 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11350 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11729 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15370 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25225 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12472 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14386 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26229 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009729001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01014641001 QRT1 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Gb_01459 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_01460 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_39595 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g19440.1 LOC_Os01g19440 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g53990.1 LOC_Os01g53990 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os04g46740.1 LOC_Os04g46740 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os07g46190.1 LOC_Os07g46190 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Len_g16179 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40175 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10267810g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_10428207g0020 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_181657g0020 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_18312g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.06 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_87592g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_9008g0020 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38949 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42451 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13329 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25019 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27618 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g34778 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38524 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35988 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20523 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31349 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18465 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60345 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010557 No alias pectin methylesterase & original description: CDS=267-1394 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025813 No alias pectin methylesterase & original description: CDS=1-1236 0.03 OrthoFinder output from all 47 species
Sam_g11685 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12543 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16125 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Sam_g36779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38210 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g51650 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Smo76951 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g109740.3.1 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g043240.4.1 Solyc07g043240 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g11483 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40908 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49901 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09242 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10170 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43829 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 96 381
No external refs found!