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  5. Msp_g39368

Msp_g39368


Description : not classified & original description: none


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g39368
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00268350 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 37... 0.06 OrthoFinder output from all 47 species
AMTR_s00076p00095550 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 31... 0.03 OrthoFinder output from all 47 species
Ala_g20055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36851.t1 Aspi01Gene36851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035579 No alias not classified & original description: CDS=1-639 0.02 OrthoFinder output from all 47 species
Cba_g04370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G003100.1 Ceric.07G003100 not classified & original description: pacid=50627854... 0.03 OrthoFinder output from all 47 species
Ceric.07G039600.1 Ceric.07G039600 not classified & original description: pacid=50627588... 0.04 OrthoFinder output from all 47 species
Ceric.17G074200.1 Ceric.17G074200 not classified & original description: pacid=50618394... 0.03 OrthoFinder output from all 47 species
Ceric.37G066200.1 Ceric.37G066200 not classified & original description: pacid=50616043... 0.03 OrthoFinder output from all 47 species
Dac_g14270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017753001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.02 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.04 OrthoFinder output from all 47 species
Gb_22111 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g47480.2 LOC_Os07g47480 Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species
LOC_Os08g31140.1 LOC_Os08g31140 Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
LOC_Os09g20000.1 LOC_Os09g20000 Heavy metal-associated isoprenylated plant protein 20... 0.02 OrthoFinder output from all 47 species
Len_g02639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011436 No alias not classified & original description: CDS=202-840 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018364 No alias not classified & original description: CDS=311-727 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022933 No alias not classified & original description: CDS=131-1195 0.02 OrthoFinder output from all 47 species
Sam_g12842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080070.4.1 Solyc01g080070 Heavy metal-associated isoprenylated plant protein 32... 0.02 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.02 OrthoFinder output from all 47 species
Spa_g25571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 2 53
No external refs found!