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  5. Msp_g39102

Msp_g39102 (ADT1)


Aliases : ADT1

Description : arogenate dehydratase *(ADT) & original description: none


Gene families : OG0000302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g39102
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00217260 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
Ala_g08752 ADT6 arogenate dehydratase *(ADT) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g12170 ADT6 arogenate dehydratase *(ADT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0071.g036867 ADT6 arogenate dehydratase *(ADT) & original description: CDS=285-1340 0.01 OrthoFinder output from all 47 species
Azfi_s0074.g037290 ADT6 arogenate dehydratase *(ADT) & original description: CDS=50-1198 0.02 OrthoFinder output from all 47 species
Gb_31913 ADT1 arogenate dehydratase (ADT) 0.01 OrthoFinder output from all 47 species
Spa_g06073 ADT6 arogenate dehydratase *(ADT) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g28895 ADT6 arogenate dehydratase *(ADT) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!