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  5. Msp_g38876

Msp_g38876


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38876

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT5G01880 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g06027 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Cba_g05766 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.15G044900.1 Ceric.15G044900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.22G021000.1 Ceric.22G021000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g05980 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g05205 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g30102 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g39720 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e003426_P001 XERICO, Zm00001e003426 ubiquitin protein ligase (XERICO) 0.04 OrthoFinder output from all 47 species
Zm00001e019438_P001 Zm00001e019438 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0060632 regulation of microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 209 253
No external refs found!