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  5. Msp_g38658

Msp_g38658


Description : component *(eS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38658

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
AT5G52650 No alias RNA binding Plectin/S10 domain-containing protein 0.01 OrthoFinder output from all 47 species
Adi_g125689 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ala_g38517 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g40343 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aop_g25175 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Aop_g37205 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025251 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Cba_g15143 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cba_g24522 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.23G017600.1 Ceric.23G017600 component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dac_g26317 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
GSVIVT01019409001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01028854001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_10517 No alias component RPS10 of SSU proteome 0.01 OrthoFinder output from all 47 species
Gb_10518 No alias component RPS10 of SSU proteome 0.01 OrthoFinder output from all 47 species
LOC_Os01g73160.1 LOC_Os01g73160 component RPS10 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os04g35090.1 LOC_Os04g35090 component RPS10 of SSU proteome 0.01 OrthoFinder output from all 47 species
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.01 OrthoFinder output from all 47 species
Msp_g16642 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Pp3c14_1810V3.1 Pp3c14_1810 RNA binding Plectin/S10 domain-containing protein 0.01 OrthoFinder output from all 47 species
Pp3c23_13100V3.1 Pp3c23_13100 RNA binding Plectin/S10 domain-containing protein 0.03 OrthoFinder output from all 47 species
Sam_g14221 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g13745 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g21377 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g02351 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Tin_g35060 No alias component *(eS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Zm00001e040881_P001 Zm00001e040881 component RPS10 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!