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  5. Msp_g38653

Msp_g38653 (RD21, RD21A)


Aliases : RD21, RD21A

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38653

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00208220 RD21, RD21A,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00215790 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 OrthoFinder output from all 47 species
Ala_g12707 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aob_g22021 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0229.g059125 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G100700.1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Cre05.g247851 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os09g38920.1 SAG12, LOC_Os09g38920 Senescence-specific cysteine protease SAG12... 0.04 OrthoFinder output from all 47 species
Lfl_g21283 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Lfl_g30447 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Mp4g08490.1 RD21, RD21A Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 OrthoFinder output from all 47 species
Nbi_g04349 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g44611 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Sam_g44613 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Solyc12g088670.2.1 RD21, RD21A,... Low-temperature-induced cysteine proteinase (Fragment)... 0.03 OrthoFinder output from all 47 species
Spa_g36595 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Spa_g37543 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Spa_g40110 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Zm00001e022426_P001 RD21, RD21A,... Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036416_P001 SAG12, Zm00001e036416 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.01 OrthoFinder output from all 47 species
Zm00001e036418_P001 SAG12, Zm00001e036418 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e036419_P001 SAG12, Zm00001e036419 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e036420_P001 SAG12, Zm00001e036420 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e039782_P001 Zm00001e039782 Fruit bromelain OS=Ananas comosus (sp|o23791|brom1_anaco... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 46 105
IPR000668 Peptidase_C1A_C 142 353
No external refs found!