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  5. Msp_g38433

Msp_g38433


Description : not classified & original description: none


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38433

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00072310 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.04 OrthoFinder output from all 47 species
Ala_g31488 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Aop_g20702 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G073700.1 Ceric.31G073700 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021352.57 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 OrthoFinder output from all 47 species
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Mp6g18130.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Ppi_g10612 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g29350 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Spa_g33042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010555_P001 Zm00001e010555 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 272 344
IPR004160 Transl_elong_EFTu/EF1A_C 352 459
IPR000795 T_Tr_GTP-bd_dom 5 245
No external refs found!