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  5. Msp_g38403

Msp_g38403 (STPL, WOX8)


Aliases : STPL, WOX8

Description : WOX-type transcription factor & original description: none


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38403

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00405p00009920 WUS, PGA6, WUS1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Adi_g077524 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35686 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35638 STPL, WOX8 WOX-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene63553.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63733.t1 STIP, HB-3,... WOX-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0123.g048427 STIP, HB-3, WOX9 WOX-type transcription factor & original description: CDS=1-1377 0.01 OrthoFinder output from all 47 species
Cba_g58692 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G009200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z064100.1 WOX12, Ceric.1Z064100 WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z064800.1 WOX12, Ceric.1Z064800 WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z182700.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g07674 PFS2, HOS9, WOX6 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50892 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29650 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
GSVIVT01016360001 WOX5 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_12565 WOX4 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
LOC_Os08g14400.1 WOX12, LOC_Os08g14400 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_10234279g0010 STPL, WOX8 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_10344604g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_1910g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Solyc03g096300.3.1 WOX5, Solyc03g096300 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Solyc04g078650.4.1 WOX4, Solyc04g078650 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Solyc06g075567.1.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Spa_g29226 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36523 STPL, WOX8 WOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006644_P002 WUS, PGA6, WUS1,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 106 166
No external refs found!