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  5. Msp_g38358

Msp_g38358


Description : not classified & original description: none


Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38358
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00154520 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 OrthoFinder output from all 47 species
AT4G34250 KCS16 3-ketoacyl-CoA synthase 16 0.02 OrthoFinder output from all 47 species
Adi_g109780 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68525.t1 KCS4, Aspi01Gene68525 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Cre17.g722150 KCS4 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
Dde_g06566 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_32625 KCS11 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
LOC_Os09g19650.1 KCS17, LOC_Os09g19650 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
LOC_Os10g07010.1 KCS1, LOC_Os10g07010 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Ore_g41435 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31874 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05562 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51546 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002667_P002 KCS1, Zm00001e002667 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!