Smo89607 (PACid_15410843)


Aliases : PACid_15410843

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein FUNCTIONS IN: zinc ion binding EXPRESSED IN: 24 plant structures EXPRESSED DURING: 15 growth stages CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957) BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G45180.1) Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0 Bacteria - 0 Metazoa - 736 Fungi - 347 Plants - 385 Viruses - 0 Other Eukaryotes - 339 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000178 (Gene family) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo89607
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT4G31450 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G24870 No alias RING/U-box superfamily protein 0.03 Gene family
Solyc09g007620.2.1 Solyc09g007620.2 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 79 121
No external refs found!