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  5. Msp_g37518

Msp_g37518 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0011557 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g37518

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G094900.1 Ceric.04G094900 not classified & original description: pacid=50632414... 0.03 OrthoFinder output from all 47 species
Ceric.26G039600.1 OTP84, Ceric.26G039600 not classified & original description: pacid=50599489... 0.03 OrthoFinder output from all 47 species
Ceric.32G020200.1 EMB2758, Ceric.32G020200 not classified & original description: pacid=50598794... 0.03 OrthoFinder output from all 47 species
Ppi_g08772 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51313 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 220
IPR002885 Pentatricopeptide_repeat 525 551
IPR002885 Pentatricopeptide_repeat 223 250
IPR002885 Pentatricopeptide_repeat 497 523
IPR002885 Pentatricopeptide_repeat 600 621
IPR002885 Pentatricopeptide_repeat 117 165
IPR002885 Pentatricopeptide_repeat 421 469
IPR002885 Pentatricopeptide_repeat 320 369
No external refs found!