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  5. Msp_g36795

Msp_g36795


Description : REM-type transcription factor & original description: none


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g36795
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AT3G19184 No alias AP2/B3-like transcriptional factor family protein 0.03 OrthoFinder output from all 47 species
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.03 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15351 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24779.t1 Aspi01Gene24779 REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24780.t1 Aspi01Gene24780 REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0198.g057387 No alias REM-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.07G043800.1 Ceric.07G043800 REM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G017400.1 Ceric.14G017400 REM-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G010700.1 Ceric.38G010700 REM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15058 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18248 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41437 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
GSVIVT01031848001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_07025 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.06 OrthoFinder output from all 47 species
Len_g03186 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433064g0010 No alias transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g35599 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c7_12680V3.1 Pp3c7_12680 AP2/B3-like transcriptional factor family protein 0.02 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11583 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004736 No alias REM-type transcription factor & original description: CDS=35-988 0.06 OrthoFinder output from all 47 species
Sam_g14184 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Smo424732 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Solyc01g108130.4.1 Solyc01g108130 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Solyc06g034140.3.1 Solyc06g034140 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Solyc10g053890.2.1 Solyc10g053890 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Spa_g49592 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000624_P003 Zm00001e000624 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Zm00001e020584_P001 Zm00001e020584 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 140 229
No external refs found!