Msp_g36294


Description : not classified & original description: none


Gene families : OG0003479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g36294

Target Alias Description ECC score Gene Family Method Actions
Adi_g068783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20383 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27303 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21824 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70643 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20448 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30992 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g22835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22865 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23334 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28726 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g28733 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g51836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26361 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g40850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g38094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 152 177
IPR002885 Pentatricopeptide_repeat 50 72
No external refs found!