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  5. Msp_g36151

Msp_g36151 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Msp_g36151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00191700 PDR11, ATPDR11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Aev_g14772 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011363 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=146-4561 0.03 OrthoFinder output from all 47 species
Ceric.10G030800.1 PEN3, ABCG36,... subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cre12.g540650 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01017204001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_05443 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437002g0020 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_165288g0010 PDR1, ATPDR1 ABC transporter G family member 36 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_949447g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Ppi_g13837 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000037 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=400-4878 0.03 OrthoFinder output from all 47 species
Sam_g37860 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo118688 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc01g101070.3.1 PIS1, ABCG37,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc05g053600.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc05g053610.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e019932_P002 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 721 782
IPR003439 ABC_transporter-like_ATP-bd 874 1026
IPR003439 ABC_transporter-like_ATP-bd 168 350
IPR013525 ABC_2_trans 1171 1384
IPR013525 ABC_2_trans 504 716
IPR043926 ABCG_dom 383 436
IPR029481 ABC_trans_N 95 145
No external refs found!