1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g36064

Msp_g36064


Description : not classified & original description: none


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g36064
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Ala_g15870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44577 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08623 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Pp3c17_19726V3.1 Pp3c17_19726 RNA helicase family protein 0.01 OrthoFinder output from all 47 species
Smo419303 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 287 443
IPR007502 Helicase-assoc_dom 744 817
IPR001650 Helicase_C 549 680
IPR011709 DEAD-box_helicase_OB_fold 902 981
IPR014720 dsRBD_dom 1084 1141
No external refs found!