Msp_g35953


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g35953

Target Alias Description ECC score Gene Family Method Actions
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25155.t1 Aspi01Gene25155 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Nbi_g12033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35009 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g23735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013142 No alias not classified & original description: CDS=1-786 0.03 OrthoFinder output from all 47 species
Sam_g51361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g009590.1.1 Solyc09g009590 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Tin_g03055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!