Aliases : TOP1BETA, TOP1
Description : DNA topoisomerase *(TOP1) & original description: none
Gene families : OG0002461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002461_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g35484 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00061p00026580 | MGO1, TOP1,... | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.02 | OrthoFinder output from all 47 species | |
AT5G55300 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase I alpha | 0.03 | OrthoFinder output from all 47 species | |
Aob_g41324 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g14348 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0176.g056031 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: CDS=260-4141 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07548 | MGO1, TOP1, TOP1ALPHA | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g05782 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g04011 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g07113 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01030405001 | TOP1BETA, TOP1 | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.03 | OrthoFinder output from all 47 species | |
Len_g35774 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11791 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g18323 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No external refs found! |