Smo86052 (PACid_15419869)

Aliases : PACid_15419869

Description : 29.3.3 protein.targeting.chloroplast Encodes a thylakoidal processing peptidase that removes signal sequences from proteins synthesized in the cytoplasm and transported into the thylakoid lumen. thylakoid processing peptide (TPP) CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756) BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1) Has 9797 Blast hits to 9593 proteins in 2427 species: Archae - 0 Bacteria - 7318 Metazoa - 215 Fungi - 115 Plants - 235 Viruses - 0 Other Eukaryotes - 1914 (source: NCBI BLink). & (chl4|524861 : 144.0

Gene families : OG_01_0001751 (Gene family) Phylogenetic Tree(s): OG0001751_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Smo86052
Cluster HCCA cluster: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Zm00001d016036 GRMZM2G039930 29.3.3 protein.targeting.chloroplast Encodes a signal... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019533 Peptidase_S26 40 122
No external refs found!