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  5. Msp_g35358

Msp_g35358 (PDR1, ATPDR1)


Aliases : PDR1, ATPDR1

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g35358
Cluster HCCA: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Aob_g22545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000270.11 PDR1, ATPDR1 ABC transporter G family member 38 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020892.22 ATPDR7, PDR7 ABC transporter G family member 51 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_18770g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g24380.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp8g13070.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e024978_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 772 834
IPR003439 ABC_transporter-like_ATP-bd 220 402
IPR043926 ABCG_dom 435 489
IPR043926 ABCG_dom 1118 1192
IPR003439 ABC_transporter-like_ATP-bd 937 1089
IPR013525 ABC_2_trans 1235 1444
IPR013525 ABC_2_trans 555 767
IPR029481 ABC_trans_N 113 195
No external refs found!