Smo85947 (PACid_15401458)


Aliases : PACid_15401458

Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein FUNCTIONS IN: polygalacturonase activity INVOLVED IN: carbohydrate metabolic process LOCATED IN: endomembrane system CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743) BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1) Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4 Bacteria - 1235 Metazoa - 14 Fungi - 1418 Plants - 1493 Viruses - 0 Other Eukaryotes - 136 (source: NCBI BLink). & (loc_os02g03750.1 : 354.0


Gene families : OG_01_0000383 (Gene family) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo85947
Cluster HCCA cluster: Cluster_190


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 67 384
No external refs found!