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  5. Msp_g35116

Msp_g35116 (TTL1)


Aliases : TTL1

Description : not classified & original description: none


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g35116
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00174p00014780 TTL3, VIT,... Inactive TPR repeat-containing thioredoxin TTL3... 0.02 OrthoFinder output from all 47 species
AT3G14950 TTL2 tetratricopetide-repeat thioredoxin-like 2 0.02 OrthoFinder output from all 47 species
AT5G10090 TPR13 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g020034 TTL3, VIT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37899 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g26452 TTL1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g09492 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16305 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g40020 TTL1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g08772 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09603 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g13784 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14242 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g57995 TTL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G088900.1 TTL3, VIT,... not classified & original description: pacid=50584923... 0.06 OrthoFinder output from all 47 species
Ceric.13G017700.1 TTL1, Ceric.13G017700 not classified & original description: pacid=50636857... 0.03 OrthoFinder output from all 47 species
Ceric.27G040400.1 TTL3, VIT,... not classified & original description: pacid=50605732... 0.06 OrthoFinder output from all 47 species
Dac_g01798 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14546 TTL1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g15649 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g22529 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22590 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46240 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48474 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04986 TTL3, VIT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07058 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08577 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01009014001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01014216001 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020699001 TTL3, VIT Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
GSVIVT01034049001 TPR14 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_36115 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.05 OrthoFinder output from all 47 species
LOC_Os01g42960.1 TTL1, LOC_Os01g42960 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
LOC_Os05g11990.1 TTL1, LOC_Os05g11990 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g18412 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426265g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
Mp6g04200.1 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g32641 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42710 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07534 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g29036 TTL1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g07135 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17444 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30541 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01359 TTL1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g02414 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06996 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17078 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001174 TTL1 not classified & original description: CDS=524-3337 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015765 TTL1 not classified & original description: CDS=75-2582 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0270.g027013 TTL1 not classified & original description: CDS=784-3654 0.03 OrthoFinder output from all 47 species
Sam_g13777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo168306 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc07g062580.4.1 TTL1, Solyc07g062580 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species
Solyc10g007240.3.1 TTL1, Solyc10g007240 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09257 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16173 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10854 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g14806 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e020701_P001 TTL1, Zm00001e020701 scaffold protein (TTL) of brassinosteroid signalling 0.05 OrthoFinder output from all 47 species
Zm00001e023863_P001 TPR14, Zm00001e023863 Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
Zm00001e026052_P001 TTL1, Zm00001e026052 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species
Zm00001e027870_P001 TTL1, Zm00001e027870 scaffold protein (TTL) of brassinosteroid signalling 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 873 960
No external refs found!