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  5. Msp_g35018

Msp_g35018 (RPL24A)


Aliases : RPL24A

Description : component *(eL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g35018

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00055300 RPL24A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT2G36620 RPL24A ribosomal protein L24 0.02 OrthoFinder output from all 47 species
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.04 OrthoFinder output from all 47 species
Ala_g20428 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Aop_g07149 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001093.9 STV1, RPL24, RPL24B No description available 0.02 OrthoFinder output from all 47 species
Cre09.g391097 STV1, RPL24, RPL24B Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Dac_g13575 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g45784 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
GSVIVT01010601001 RPL24A Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01033743001 STV1, RPL24, RPL24B Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os01g59990.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.06 OrthoFinder output from all 47 species
Lfl_g26179 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Mp5g17510.1 RPL24A pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 OrthoFinder output from all 47 species
Pnu_g22076 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c13_10770V3.1 RPL24A, Pp3c13_10770 ribosomal protein L24 0.02 OrthoFinder output from all 47 species
Pp3c3_8930V3.1 RPL24A, Pp3c3_8930 Ribosomal protein L24e family protein 0.01 OrthoFinder output from all 47 species
Sam_g04326 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g06964 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc09g008800.3.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 OrthoFinder output from all 47 species
Spa_g03066 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g23099 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Zm00001e004947_P001 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.06 OrthoFinder output from all 47 species
Zm00001e012463_P004 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.06 OrthoFinder output from all 47 species
Zm00001e027315_P001 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!