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  5. Msp_g34956

Msp_g34956 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : not classified & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g34956

Target Alias Description ECC score Gene Family Method Actions
Aop_g23326 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G065800.1 PDR11, ATPDR11,... subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.19G066000.1 ABCG40, PDR12,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01017202001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os01g52560.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os07g33780.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_165288g0010 PDR1, ATPDR1 ABC transporter G family member 36 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_42871g0020 PEN3, ABCG36,... ABC transporter G family member 40 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g07030.1 PDR6, ATPDR6 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g06663 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11856 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g50121 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019932_P002 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e030669_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e033689_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 14 135
No external refs found!