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  5. Msp_g34612

Msp_g34612


Description : not classified & original description: none


Gene families : OG0000711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g34612
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Als_g43834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G068900.1 Ceric.03G068900 not classified & original description: pacid=50572983... 0.03 OrthoFinder output from all 47 species
Ceric.1Z070300.1 Ceric.1Z070300 not classified & original description: pacid=50628351... 0.03 OrthoFinder output from all 47 species
Ceric.1Z142800.1 Ceric.1Z142800 not classified & original description: pacid=50565845... 0.03 OrthoFinder output from all 47 species
Ceric.1Z277600.1 Ceric.1Z277600 not classified & original description: pacid=50586305... 0.03 OrthoFinder output from all 47 species
Ceric.35G058300.1 Ceric.35G058300 not classified & original description: pacid=50581252... 0.02 OrthoFinder output from all 47 species
Ceric.37G059900.1 Ceric.37G059900 not classified & original description: pacid=50616696... 0.02 OrthoFinder output from all 47 species
Ehy_g29500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g13700.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g37876 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g45227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025295 No alias not classified & original description: CDS=1-333 0.04 OrthoFinder output from all 47 species
Smo422182 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo428274 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR011058 Cyanovirin-N 39 136
No external refs found!