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  5. Msp_g34543

Msp_g34543


Description : not classified & original description: none


Gene families : OG0012738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g34543
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G078100.1 Ceric.04G078100 not classified & original description: pacid=50631572... 0.04 OrthoFinder output from all 47 species
Nbi_g20493 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 306 352
IPR002885 Pentatricopeptide_repeat 102 148
IPR002885 Pentatricopeptide_repeat 204 250
IPR002885 Pentatricopeptide_repeat 280 305
IPR002885 Pentatricopeptide_repeat 382 406
IPR002885 Pentatricopeptide_repeat 76 98
No external refs found!