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  5. Msp_g33490

Msp_g33490


Description : not classified & original description: none


Gene families : OG0004909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004909_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g33490
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Aob_g19835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
BP GO:0006979 response to oxidative stress IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008810 cellulase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030248 cellulose binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024589 Ligninase_C 297 373
IPR002016 Haem_peroxidase 62 292
No external refs found!