Msp_g33329


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g33329

Target Alias Description ECC score Gene Family Method Actions
Aev_g18166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46724 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06035 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07029 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16505 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g59712 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g010584 No alias not classified & original description: CDS=134-2257 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g042995 No alias not classified & original description: CDS=1-2949 0.05 OrthoFinder output from all 47 species
Azfi_s0109.g045373 No alias not classified & original description: CDS=1-2985 0.06 OrthoFinder output from all 47 species
Azfi_s0236.g059504 No alias not classified & original description: CDS=1-2307 0.04 OrthoFinder output from all 47 species
Azfi_s0237.g059606 No alias not classified & original description: CDS=1-2121 0.05 OrthoFinder output from all 47 species
Azfi_s0264.g060909 EMB2758 not classified & original description: CDS=1-2373 0.08 OrthoFinder output from all 47 species
Azfi_s0283.g063072 No alias not classified & original description: CDS=1-2475 0.04 OrthoFinder output from all 47 species
Azfi_s0601.g078897 No alias not classified & original description: CDS=1-2646 0.04 OrthoFinder output from all 47 species
Cba_g06548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11852 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29842 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G010500.1 Ceric.04G010500 not classified & original description: pacid=50631555... 0.04 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.04 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.04 OrthoFinder output from all 47 species
Ceric.17G033700.1 VAC1, ECB2,... not classified & original description: pacid=50617387... 0.06 OrthoFinder output from all 47 species
Ceric.18G023200.1 Ceric.18G023200 not classified & original description: pacid=50622130... 0.04 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.04 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.05 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.04 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.26G056100.1 Ceric.26G056100 not classified & original description: pacid=50599681... 0.04 OrthoFinder output from all 47 species
Ceric.34G031000.1 CRR22, Ceric.34G031000 not classified & original description: pacid=50623613... 0.04 OrthoFinder output from all 47 species
Ceric.36G053200.1 CRR22, Ceric.36G053200 not classified & original description: pacid=50568627... 0.04 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g35673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42364 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05349 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23577 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24873 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36765 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44381 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g48142 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
MA_55967g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_656915g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46092 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47672 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17487 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20260 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20492 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g23739 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g39284 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g35296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g28712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g119120.3.1 Solyc03g119120 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Spa_g01532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02644 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06017 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06116 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10760 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14171 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14546 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16206 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17180 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27801 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27905 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28134 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54636 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05462 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g31218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 331 378
IPR002885 Pentatricopeptide_repeat 228 275
IPR002885 Pentatricopeptide_repeat 24 71
IPR002885 Pentatricopeptide_repeat 127 173
IPR002885 Pentatricopeptide_repeat 101 124
IPR002885 Pentatricopeptide_repeat 203 225
IPR002885 Pentatricopeptide_repeat 305 328
No external refs found!