Smo84608 (PACid_15418495)


Aliases : PACid_15418495

Description : 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family Encodes a putative transcription factor (MYB55). myb domain protein 55 (MYB55) CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495) BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os01g18240.1 : 162.0


Gene families : OG_01_0000003 (Gene family) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo84608
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.02 Gene family
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.02 Gene family
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.04 Gene family
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 Gene family
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 Gene family
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.02 Gene family
AT3G46130 ATMYB48-1,... myb domain protein 48 0.02 Gene family
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.02 Gene family
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 Gene family
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.04 Gene family
AT5G59780 ATMYB59-1,... myb domain protein 59 0.02 Gene family
GSVIVT01004317001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
GSVIVT01007670001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01008090001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01009032001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01010086001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01012447001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01013126001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01015575001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01017716001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01018234001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01018577001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
GSVIVT01019410001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
GSVIVT01025269001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.06 Gene family
GSVIVT01025452001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
GSVIVT01027810001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01028235001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01030434001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01030708001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01031341001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01032088001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
GSVIVT01032564001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01035177001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01035332001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g03720 Os01g0128000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g18240 Os01g0285300 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os01g36460 Os01g0545100 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os02g02370 Os02g0114800 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os02g51799 Os02g0754400 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os02g54520 Os02g0786300,... 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os03g04900 Os03g0142600 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os04g38740 Os04g0461000 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os04g50770 Os04g0594100 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os05g04820 Os05g0140100 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
LOC_Os05g46610 Os05g0543600 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os06g02250 Os06g0112700 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os08g05520 Os08g0151300 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os09g36250 Os09g0532900 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os09g36730 Os09g0538400 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os10g33810 Os10g0478300 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os12g33070 Os12g0515300 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_10431212g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_124887g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_128244g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_137453g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_139238g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_1589g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_16413g0010 No alias No description available 0.01 Gene family
MA_199974g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_20462g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_223201g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_64405g0010 No alias No description available 0.01 Gene family
MA_67705g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_81763g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
MA_93127g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc01g087130.3.1 Solyc01g087130.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Solyc01g102340.3.1 Solyc01g102340.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc02g067760.3.1 Solyc02g067760.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc02g082040.3.1 Solyc02g082040.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc03g112390.3.1 Solyc03g112390.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Solyc04g005600.2.1 Solyc04g005600.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Solyc05g009230.2.1 Solyc05g009230.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g014290.3.1 Solyc05g014290.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc06g069850.3.1 Solyc06g069850.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc06g071690.3.1 Solyc06g071690.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc06g074910.3.1 Solyc06g074910.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc08g079270.3.1 Solyc08g079270.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc09g090130.3.1 Solyc09g090130.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g005240.3.1 Solyc10g005240.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g055410.2.1 Solyc10g055410.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g081490.2.1 Solyc10g081490.2 No description available 0.02 Gene family
Solyc11g065840.2.1 Solyc11g065840.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d004126 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d011669 GRMZM2G003406 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d014364 GRMZM2G161512 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d014989 GRMZM2G088189 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d017268 GRMZM2G095904 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d017385 GRMZM2G040924 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d020405 GRMZM2G169356 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d022227 GRMZM2G056407,... 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d022628 GRMZM2G000818 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d023931 GRMZM2G052606 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d024784 GRMZM2G127490 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d025864 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d025930 GRMZM2G001106 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d032032 GRMZM2G037650 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d036577 GRMZM2G343068 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d038878 GRMZM2G175232 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d040527 GRMZM2G017520 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Zm00001d043729 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d051520 GRMZM5G833253 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d052069 GRMZM2G015021 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d053210 GRMZM2G138427 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
No external refs found!